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Contents Reference

A–Z

Every feature, A–Z

Every feature in one table, with where each one lives in the app.

CapabilityWhereSection
A conversation per projectEach project keeps its own thread, and several can run at once. ARC panel (any project) 02 The agent
A public registry of skillsBrowse what other labs have written, install it, and ARC can use it immediately. Settings → ARC → Skills → Browse registry 02 The agent
A workspace of projectsOne root folder holds one folder per project. That is the whole data model. Dashboard 01 The record
Add referencesHands the manuscript to the agent to find and insert the citations it is missing. Editor → Add refs 03 Writing
Animal coloniesAnimals, cages and breeding — matings, litters, weaning, archiving. Lab → Animals 05 The lab
ARC at Home, across the whole workspaceStep out to the dashboard and the agent widens its scope to every project you have. Dashboard → ARC 02 The agent
Background work you can always see and stopA live pill above the project header for anything running, with a Stop button. Project header → job pills 02 The agent
Chemical structuresDrop in a .mol, .sdf or .smi and get a drawn structure instead of a wall of coordinates. Project → structure files · Lab → Inventory 04 Analysis
Chemical structures inside your writingA smiles fenced block renders as a drawn molecule in Preview. Editor → Preview 03 Writing
Cloud jobsHand off the long-running work, shut the laptop, pick the results up later. Project → Run Analysis / Draft Text → Cloud 04 Analysis
Cloud projects and two-way syncPut a project in the cloud so it follows you between machines — and to your phone. Project → Sync · Cloud Projects 06 Together
Code, read and runPython, R, notebooks, JSON, config — opened properly, edited in place. Project → any code file 04 Analysis
Custom sub-agentsDefine a specialist and ARC delegates to it. Settings → ARC → Sub-agents 02 The agent
Data SpacesPool your datasets into a linked graph, and let the agent reason across the lot. Lab → Data Spaces 04 Analysis
Draft TextCommission a piece of writing — locally, or in the cloud if it is going to take a while. Project → Draft Text 03 Writing
Edits that cannot clobber youIf you kept typing while the agent was thinking, the edit is discarded rather than applied over your work. Editor 03 Writing
Encrypted backupsReal backups: encrypted on your machine, restorable, and unreadable by us. Project menu → Back up · Settings → System 07 Control
Everyone on an account shares one balanceCredits belong to the account, not to the person who spent them. Account menu → Usage · Team Members 00 Start here
Experiments and templatesStart an experiment from your own house format instead of a blank file. Project → New experiment · Settings → Templates 01 The record
Files, opened in the right viewerClick any file and Bench renders it properly instead of offering to download it. Project → file panel 01 The record
Hand it specific files — including ones outside the projectDrag and drop onto the chat, or use +, to put exactly the right file in front of the agent. ARC panel → + or drag-and-drop 02 The agent
Inline edit verbsSelect a sentence, pick a verb, get it back rewritten in a few seconds. Editor → selection toolbar 03 Writing
InventorySupplies, reagents and equipment — with structures drawn automatically. Lab → Inventory 05 The lab
It reads figuresPoint ARC at a plot, gel, microscope image or screenshot and it looks at it. ARC panel 02 The agent
Local project or cloud project?A local project lives only on your machine. A cloud project also lives on our servers, which is what makes it shareable and visible on your phone. Project → Sync · Cloud Projects 00 Start here
Local-first, in the literal senseYour projects are folders on your disk. Uninstall Bench and you still have everything. Everywhere 07 Control
Long conversations keep goingA session that runs all afternoon compacts itself and carries on. ARC panel 02 The agent
macOS and Windows, including managed machinesSigned on both, and it survives your institution's network. Installation 07 Control
Notes on a documentAnnotate a passage or leave a free-standing note, and keep them as one list. Document viewer → notes pane 03 Writing
Notes, linked into a body of thoughtA cross-project vault of markdown notes with wiki-links, backlinks and a graph. Notes 01 The record
PDFs and Word documentsRead, annotate and review a paper or a collaborator's draft without leaving the project. Project → any .pdf / .docx 03 Writing
Pings — talk to your lab inside BenchDirect messages and groups, with attachments, without another tab open. Pings panel 06 Together
Plan modeFor anything consequential, ARC writes the plan first and waits for you to approve it. ARC panel · Project → Plans 02 The agent
PresentationsSlides authored as text, presented full-screen, kept inside the project. Project → Presentations 03 Writing
Pricing — what a credit costsOne hundred credits to the dollar, with a bonus on larger purchases. Account menu → Usage 00 Start here
Privacy ModeLock a project to your machine — enforced at the tool level, not promised in a settings page. Project header → shield toggle 07 Control
Privacy Mode still uses creditsIt stops your data leaving your machine. It does not stop the agent thinking. Project header → shield toggle 00 Start here
Project rationaleWhy this project exists, written down once, and read by the agent every time. Project → rationale card in the rail 01 The record
Protein structures.pdb, .cif and .mmcif open in a real 3D viewer. Project → structure files 04 Analysis
ProvenanceEvery result traceable to its source — recorded as the work happens, not reconstructed afterwards. Lab → Provenance 05 The lab
Publish a skill you wrotePass a procedure on, under your own name. Settings → ARC → Skills → Share 02 The agent
Quick captureGet a thought into the record before it evaporates. Notes → Cmd+Shift+N 01 The record
Raw sequencing data, pre-processedPoint Bench at the server your data landed on and get analysis-ready output back. Project → Run Analysis → Pre-processing 04 Analysis
ReferralsBring a colleague in and you both get credit. Account menu → Referrals 06 Together
Research toolsLiterature search, reference databases and domain lookups the agent reaches for on its own. Extensions → Tools 02 The agent
Review doc — propose and acceptConcrete, acceptable suggestions in a drawer, not a flat write-up you have to re-apply by hand. Editor / document viewer → Review 03 Writing
Run AnalysisDescribe what you want to know. Get the code, the figures and the write-up. Project → Run Analysis 04 Analysis
Scheduled tasksWork that should happen on a cadence, with or without you. Project → Scheduled Tasks · Schedules 05 The lab
Settings, grouped by what you are changingFour tabs: System, Privacy, Templates, ARC. Settings 07 Control
Shared inventories, colonies and data spacesThe operational records a group actually shares, shared properly. Lab → Share · Data Spaces → Share 06 Together
Shared with the teamAn inventory or colony is a shared record, not a copy each. Lab → any space → Share 05 The lab
Sharing starts offThe defaults are the private ones. Settings → Privacy 07 Control
Skills — teach it a procedure onceWrite down how your lab does something and ARC follows it every time after. Settings → ARC → Skills 02 The agent
Standard and DeepChoose how hard the agent should think for the session. ARC panel → depth selector 02 The agent
Sync is not a backupSync copies what you have now, including the mistake you just made. A backup is a moment you can return to. Project menu → Back up · Settings → System 00 Start here
The Activity boardUpcoming, Running, Needs you, Done — everything the agent is doing, on one board. Activity 05 The lab
The agent knows its chemistryResolve a compound from a name, CAS number, InChIKey or structure — and get back what is actually known about it. ARC panel 04 Analysis
The agent never silently changes a saved fileEither the edit is staged in your buffer, or a banner asks you to accept it. Editor · Activity 07 Control
The iOS companionView your cloud projects and start cloud jobs from your phone. iOS App Store 06 Together
The markdown editorEdit, Preview and Changes — three tabs, no modes to learn. Project → any .md file 03 Writing
The paper libraryPapers you rely on, kept in one place and linked to the projects that use them. Library 04 Analysis
The receipt, not just the promiseA live log of every network action while Privacy Mode is on. ARC panel (Privacy Mode) · project privacy log 07 Control
To-Dos the agent can seeA task list inside every project — and ARC starts every conversation knowing what is on it. Project → To-Dos 01 The record
Updates on your termsChoose your channel, and install when it suits you. Settings → System → Software updates 07 Control
UsageSee what you have used, in the app, without doing arithmetic. Account menu → Usage 07 Control
Ways to work with other peopleThree that work properly, and one common workaround that only works within limits. Project → Sync · Lab → Share · Pings 00 Start here
What a project isA folder in your workspace, and the unit ARC thinks in. Dashboard → New project 00 Start here
What a workspace isOne folder on your computer that holds all your projects. That is the whole of it. Chosen on first launch · Settings → System 00 Start here
What Bench remembers about your workProject memory and workspace memory, kept as readable files. Workspace metadata (hidden folder, readable in Finder) 01 The record
What is due, on the dashboardDated, unfinished work from every project gathered into one quiet digest. Dashboard → top right 01 The record
What sits on your machine, and what sits on oursThe short version: everything is on your machine; some of it is also on ours, and only because you asked. Settings → Privacy 00 Start here
What things actually costRough figures for the things you will do most — with the spread, so you can see where the ceiling is. Account menu → Usage 00 Start here
What uses creditsCredits pay for thinking and computing. Storing and sharing are free. Account menu → Usage 00 Start here
What works without an internet connectionYour record does. The agent does not. Everywhere 00 Start here
When a file changes underneath youAn amber banner, and a choice: Accept or Keep mine. Editor 03 Writing
When access changesLosing access to a shared resource fails clearly, not confusingly. Anywhere shared 06 Together
Your teamTeam members one click from the account menu. Account menu → Team Members 06 Together